Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | SAMN04487898_103171 | Not Available | Negative | 1319967 - 1320401 | 16371.3 |
| acyl-coa thioester hydrolase | SAMN04487898_103172 | Not Available | Positive | 1320489 - 1320971 | 18875.7 |
| dihydroneopterin aldolase | SAMN04487898_103173 | Not Available | Negative | 1320974 - 1321345 | 14018.9 |
| glutaryl-coa dehydrogenase | SAMN04487898_103174 | Not Available | Positive | 1321387 - 1322634 | 45996.7 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04487898_103175 | Not Available | Positive | 1322640 - 1323020 | 14712.0 |
| diaminopimelate decarboxylase | SAMN04487898_103176 | Not Available | Negative | 1323086 - 1324240 | 43075.2 |
| hypothetical protein | SAMN04487898_103177 | Not Available | Positive | 1324242 - 1324418 | 7079.16 |
| aspartate kinase | SAMN04487898_103178 | Not Available | Negative | 1324431 - 1325744 | 48610.5 |
| phosphoglucomutase | SAMN04487898_103179 | Not Available | Positive | 1325974 - 1327707 | 63362.3 |
| response regulator receiver domain-containing protein | SAMN04487898_103180 | Not Available | Negative | 1327719 - 1328159 | 16856.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

