Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase | SAMN04487898_103161 | Not Available | Negative | 1303865 - 1305235 | 49680.0 |
| predicted purr-regulated permease perm | SAMN04487898_103162 | Not Available | Positive | 1305330 - 1306463 | 41489.8 |
| arginyl-trna synthetase | SAMN04487898_103163 | Not Available | Negative | 1306522 - 1308303 | 66850.2 |
| arginase | SAMN04487898_103164 | Not Available | Negative | 1308326 - 1309276 | 34758.0 |
| arginine decarboxylase | SAMN04487898_103165 | Not Available | Positive | 1309379 - 1310770 | 53993.4 |
| hypothetical protein | SAMN04487898_103166 | Not Available | Positive | 1311098 - 1312048 | 36524.3 |
| serine/threonine protein phosphatase prpc | SAMN04487898_103167 | Not Available | Positive | 1312143 - 1313522 | 50267.7 |
| cell division protein ftsw, lipid ii flippase | SAMN04487898_103168 | Not Available | Positive | 1313527 - 1317522 | 148454.0 |
| fha domain-containing protein | SAMN04487898_103169 | Not Available | Positive | 1317530 - 1318324 | 29781.6 |
| serine/threonine protein kinase | SAMN04487898_103170 | Not Available | Positive | 1318334 - 1319878 | 56599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

