Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04487898_103151 | Not Available | Positive | 1294772 - 1295716 | 35958.9 |
| hypothetical protein | SAMN04487898_103152 | Not Available | Negative | 1295991 - 1296482 | 18500.9 |
| hypothetical protein | SAMN04487898_103153 | Not Available | Positive | 1296702 - 1297376 | 25791.0 |
| hypothetical protein | SAMN04487898_103154 | Not Available | Positive | 1297467 - 1297862 | 15148.1 |
| hypothetical protein | SAMN04487898_103155 | Not Available | Negative | 1297992 - 1298993 | 37445.6 |
| hypothetical protein | SAMN04487898_103156 | Not Available | Negative | 1298997 - 1299785 | 29161.9 |
| hypothetical protein | SAMN04487898_103157 | Not Available | Negative | 1299930 - 1300811 | 33257.1 |
| hypothetical protein | SAMN04487898_103158 | Not Available | Negative | 1300828 - 1301112 | 10419.5 |
| hypothetical protein | SAMN04487898_103159 | Not Available | Negative | 1301356 - 1302534 | 46463.0 |
| arac-type dna-binding protein | SAMN04487898_103160 | Not Available | Negative | 1302667 - 1303764 | 43162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

