Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca2+-transporting atpase | SAMN04487898_103141 | Not Available | Negative | 1284207 - 1286798 | 95194.4 |
| predicted purr-regulated permease perm | SAMN04487898_103142 | Not Available | Positive | 1286944 - 1287987 | 39390.4 |
| uncharacterized membrane protein | SAMN04487898_103143 | Not Available | Positive | 1288137 - 1288688 | 20044.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_103144 | Not Available | Negative | 1288644 - 1289483 | 32100.9 |
| uncharacterized membrane protein hded, duf308 family | SAMN04487898_103145 | Not Available | Negative | 1289501 - 1290070 | 21444.3 |
| helix-turn-helix domain-containing protein | SAMN04487898_103146 | Not Available | Negative | 1290276 - 1291172 | 35020.0 |
| short-chain dehydrogenase | SAMN04487898_103147 | Not Available | Negative | 1291248 - 1292063 | 29514.1 |
| hypothetical protein | SAMN04487898_103148 | Not Available | Positive | 1292241 - 1293425 | 43766.6 |
| arac-like ligand binding domain-containing protein | SAMN04487898_103149 | Not Available | Negative | 1293455 - 1294279 | 32640.5 |
| thiosulfate dehydrogenase | SAMN04487898_103150 | Not Available | Positive | 1294373 - 1294765 | 14192.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

