Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_103131 | Not Available | Negative | 1269495 - 1270667 | 43302.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_103132 | Not Available | Negative | 1270764 - 1271363 | 23301.2 |
| ahpc/tsa family protein | SAMN04487898_103133 | Not Available | Positive | 1271546 - 1272136 | 22507.3 |
| signal transduction histidine kinase | SAMN04487898_103134 | Not Available | Positive | 1272156 - 1274426 | 85773.7 |
| peroxiredoxin | SAMN04487898_103135 | Not Available | Negative | 1274549 - 1275706 | 42967.2 |
| peroxiredoxin | SAMN04487898_103136 | Not Available | Negative | 1275740 - 1276867 | 42190.1 |
| susd family protein | SAMN04487898_103137 | Not Available | Negative | 1276906 - 1278282 | 51785.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_103138 | Not Available | Negative | 1278309 - 1281779 | 129169.0 |
| fecr family protein | SAMN04487898_103139 | Not Available | Negative | 1282219 - 1283346 | 41829.3 |
| sigma-70 region 2 | SAMN04487898_103140 | Not Available | Negative | 1283416 - 1283997 | 23011.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

