Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00984 | SAMN04487898_103121 | Not Available | Negative | 1254403 - 1255818 | Not Available |
| predicted nucleotidyltransferase | SAMN04487898_103122 | Not Available | Negative | 1255826 - 1256881 | 40667.9 |
| hypothetical protein | SAMN04487898_103123 | Not Available | Negative | 1256871 - 1257632 | 29312.5 |
| spfh domain / band 7 family protein | SAMN04487898_103124 | Not Available | Negative | 1257667 - 1258761 | 41711.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04487898_103125 | Not Available | Positive | 1259694 - 1260719 | 40041.4 |
| predicted zn-dependent peptidase | SAMN04487898_103126 | Not Available | Negative | 1260807 - 1262213 | 53048.8 |
| peroxiredoxin | SAMN04487898_103127 | Not Available | Negative | 1262237 - 1263277 | 38846.9 |
| peroxiredoxin | SAMN04487898_103128 | Not Available | Negative | 1263274 - 1264344 | 39413.3 |
| starch-binding associating with outer membrane | SAMN04487898_103129 | Not Available | Negative | 1264420 - 1265838 | 51308.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_103130 | Not Available | Negative | 1265853 - 1269299 | 125798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

