Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103111 | Not Available | Positive | 1247917 - 1248564 | 23660.8 |
| hypothetical protein | SAMN04487898_103112 | Not Available | Positive | 1248938 - 1249483 | 20253.7 |
| hypothetical protein | SAMN04487898_103113 | Not Available | Positive | 1249537 - 1249875 | 12774.4 |
| hypothetical protein | SAMN04487898_103114 | Not Available | Negative | 1249932 - 1250519 | 22273.1 |
| hth-type transcriptional regulator / antitoxin higa | SAMN04487898_103115 | Not Available | Positive | 1250628 - 1251146 | 20115.2 |
| dihydrofolate reductase | SAMN04487898_103116 | Not Available | Negative | 1251148 - 1251741 | 21761.9 |
| protein of unknown function (du1801) | SAMN04487898_103117 | Not Available | Negative | 1251842 - 1252201 | 13809.8 |
| protein of unknown function | SAMN04487898_103118 | Not Available | Positive | 1252349 - 1253413 | 41214.2 |
| protein of unknown function | SAMN04487898_103119 | Not Available | Negative | 1253414 - 1253872 | 16740.2 |
| hypothetical protein | SAMN04487898_103120 | Not Available | Negative | 1253869 - 1254330 | 17476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

