Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10391 | Not Available | Negative | 1232327 - 1232851 | 19782.8 |
| hypothetical protein | SAMN04487898_10392 | Not Available | Positive | 1233027 - 1233701 | 25899.6 |
| dinb family protein | SAMN04487898_10393 | Not Available | Positive | 1233826 - 1234221 | 15188.1 |
| protein of unknown function | SAMN04487898_10394 | Not Available | Negative | 1234243 - 1234617 | 13762.6 |
| hypothetical protein | SAMN04487898_10395 | Not Available | Negative | 1234635 - 1234991 | 13524.2 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_10396 | Not Available | Positive | 1235048 - 1236256 | 44809.3 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN04487898_10397 | Not Available | Positive | 1236323 - 1237345 | 37676.5 |
| hypothetical protein | SAMN04487898_10398 | Not Available | Positive | 1237342 - 1238544 | 44201.4 |
| hypothetical protein | SAMN04487898_10399 | Not Available | Negative | 1238590 - 1239216 | 23799.7 |
| mrna interferase higb | SAMN04487898_103100 | Not Available | Positive | 1239594 - 1239926 | 12750.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

