Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10161 | Not Available | Positive | 79149 - 82481 | 121246.0 |
| starch-binding associating with outer membrane | SAMN04487898_10162 | Not Available | Positive | 82499 - 84106 | 58983.5 |
| protein of unknown function | SAMN04487898_10163 | Not Available | Positive | 84132 - 85070 | 33863.6 |
| endoglucanase | SAMN04487898_10164 | Not Available | Positive | 85104 - 86132 | 39214.3 |
| sialate o-acetylesterase | SAMN04487898_10165 | Not Available | Positive | 86142 - 87662 | 56005.6 |
| protein of unknown function | SAMN04487898_10166 | Not Available | Positive | 87704 - 89047 | 50335.1 |
| sugar phosphate permease | SAMN04487898_10167 | Not Available | Positive | 89037 - 90284 | 45527.8 |
| glycosyl hydrolases family 16 | SAMN04487898_10168 | Not Available | Positive | 90281 - 91219 | 36371.1 |
| hypothetical protein | SAMN04487898_10169 | Not Available | Negative | 91329 - 91670 | 13166.4 |
| protein of unknown function (4846) | SAMN04487898_10170 | Not Available | Negative | 91762 - 92541 | 29360.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

