Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_04885 | Not Available | Positive | 1085232 - 1086176 | 35178.6 |
| dna methyltransferase | AQF98_04890 | P05302 | Negative | 1086302 - 1088524 | 85088.2 |
| endonuclease | AQF98_04895 | Q9RLM5 | Negative | 1088631 - 1089128 | 19564.8 |
| hypothetical protein | AQF98_04900 | Not Available | Negative | 1089205 - 1089663 | 17447.3 |
| hypothetical protein | AQF98_04905 | Not Available | Negative | 1090004 - 1090471 | 17715.4 |
| gdsl family lipase | AQF98_04910 | Q9HZY8 | Negative | 1090982 - 1091659 | 24387.1 |
| abc transporter | AQF98_04915 | P0A9T9 | Positive | 1091758 - 1092453 | 24898.9 |
| abc transporter permease | AQF98_04920 | Not Available | Positive | 1092446 - 1094986 | 93761.3 |
| hypothetical protein | AQF98_04925 | Not Available | Positive | 1095331 - 1096017 | 25850.5 |
| Trna-leu | Not Available | Not Available | Positive | 1096113 - 1096192 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

