Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_04835 | Not Available | Positive | 1072613 - 1072969 | 12378.7 |
| sterol desaturase | AQF98_04840 | Q6ZNB7 | Negative | 1072970 - 1074193 | 48401.5 |
| alpha/beta hydrolase | AQF98_04845 | B1XBJ6 | Negative | 1074195 - 1074947 | 28575.0 |
| amino acid dehydrogenase | AQF98_04850 | Q7NWR6 | Negative | 1075034 - 1076296 | 46050.2 |
| hydroxyproline-2-epimerase | AQF98_04855 | D2QN44 | Negative | 1076579 - 1077577 | 36399.9 |
| aldehyde dehydrogenase | AQF98_04860 | Q08IC0 | Negative | 1077561 - 1079060 | 54245.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AQF98_04865 | Q053P3 | Negative | 1079173 - 1080105 | 34142.6 |
| arac family transcriptional regulator | AQF98_04870 | Not Available | Negative | 1080521 - 1081402 | 33969.1 |
| xaa-pro aminopeptidase | AQF98_04875 | D1ZKF3 | Positive | 1082143 - 1083918 | 65757.5 |
| hypothetical protein | AQF98_04880 | Not Available | Negative | 1084422 - 1085012 | 22732.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

