Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | AQF98_04785 | B8HM61 | Negative | 1060619 - 1061890 | 47057.4 |
| glycogen synthase | AQF98_04790 | A5FG96 | Negative | 1061903 - 1063309 | 53122.4 |
| uroporphyrin-iii methyltransferase | AQF98_04795 | Not Available | Negative | 1063519 - 1064316 | 28646.6 |
| sulfate adenylyltransferase | AQF98_04800 | Q5LES3 | Negative | 1064458 - 1065705 | 46300.4 |
| sulfate adenylyltransferase | AQF98_04805 | A4T8Q2 | Negative | 1065786 - 1066691 | 34307.7 |
| phosphoadenosine phosphosulfate reductase | AQF98_04810 | Q8UH67 | Negative | 1066734 - 1067444 | 27400.5 |
| siroheme synthase | AQF98_04815 | O34430 | Negative | 1067447 - 1068958 | 54819.9 |
| uroporphyrin-iii methyltransferase | AQF98_04820 | Q58375 | Negative | 1068942 - 1069721 | 27634.6 |
| nitrite reductase | AQF98_04825 | Q42997 | Negative | 1069718 - 1071808 | 77597.8 |
| rrf2 family transcriptional regulator | AQF98_04830 | Not Available | Negative | 1071977 - 1072414 | 16188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

