Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | AQF98_04635 | Not Available | Negative | 1012898 - 1013308 | 14879.0 |
| abc transporter atp-binding protein | AQF98_04640 | P44808 | Positive | 1013788 - 1015698 | 72063.0 |
| hypothetical protein | AQF98_04645 | Not Available | Positive | 1015698 - 1016963 | 49314.1 |
| alpha-amylase | AQF98_04650 | P26612 | Negative | 1017012 - 1018487 | 56751.4 |
| thioesterase | AQF98_04655 | Q9PJK7 | Positive | 1018623 - 1019144 | 19279.2 |
| sodium:proton antiporter | AQF98_04660 | Not Available | Positive | 1019176 - 1020366 | 44090.7 |
| hypothetical protein | AQF98_04665 | Not Available | Negative | 1020370 - 1020873 | 18159.3 |
| ubiquinol-cytochrome c reductase | AQF98_04670 | Q90679 | Negative | 1020874 - 1021278 | 15496.5 |
| hypothetical protein | AQF98_04675 | Not Available | Positive | 1021491 - 1023290 | 68637.7 |
| hypothetical protein | AQF98_04680 | P54662 | Positive | 1023463 - 1024044 | 21750.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

