Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1007512 - 1007585 | Not Available |
| spore protein | AQF98_04590 | Not Available | Positive | 1007623 - 1007799 | 6529.0 |
| hypothetical protein | AQF98_04595 | Not Available | Negative | 1007957 - 1008277 | 12227.8 |
| arsr family transcriptional regulator | AQF98_04600 | Not Available | Positive | 1008416 - 1008745 | 12834.6 |
| atpase | AQF98_04605 | Not Available | Positive | 1008751 - 1009188 | 16927.9 |
| hypothetical protein | AQF98_04610 | Not Available | Positive | 1009377 - 1009748 | 13821.9 |
| dna-binding transcriptional regulator | AQF98_04615 | Not Available | Positive | 1009802 - 1010521 | 27642.4 |
| transcriptional regulator | AQF98_04620 | Not Available | Positive | 1010575 - 1011036 | 17343.5 |
| dihydroorotate dehydrogenase (quinone) | AQF98_04625 | A0M4D0 | Negative | 1011046 - 1012074 | 38324.4 |
| histidine kinase | AQF98_04630 | P71037 | Negative | 1012196 - 1012843 | 22926.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

