Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_00280 | Not Available | Negative | 56589 - 56939 | 13525.7 |
| hypothetical protein | AQF98_00285 | P39839 | Negative | 57033 - 59678 | 101027.0 |
| starch-binding protein | AQF98_00290 | Not Available | Negative | 59709 - 61106 | 52431.0 |
| susc/raga family tonb-linked outer membrane protein | AQF98_00295 | T2KPJ3 | Negative | 61116 - 64031 | 107635.0 |
| hypothetical protein | AQF98_00300 | Not Available | Negative | 64610 - 65779 | 43828.1 |
| rna polymerase subunit sigma-70 | AQF98_00305 | Not Available | Negative | 65896 - 66486 | 22960.8 |
| conjugal transfer protein trag | AQF98_00310 | Not Available | Negative | 66613 - 68676 | 77550.0 |
| relaxase | AQF98_00315 | Not Available | Negative | 68689 - 69963 | 48524.9 |
| mobilization protein | AQF98_00320 | Not Available | Negative | 69948 - 70355 | 15744.3 |
| hypothetical protein | AQF98_00325 | Not Available | Positive | 70882 - 71112 | 8761.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

