Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | AQF98_04435 | B3QXY8 | Positive | 965509 - 966855 | 51273.9 |
| four helix bundle protein | AQF98_04440 | Not Available | Positive | 966909 - 967271 | 13849.6 |
| atp-dependent clp protease proteolytic subunit | AQF98_04445 | Q64NW2 | Positive | 967334 - 968020 | 25509.7 |
| atp-dependent clp protease atp-binding subunit clpx | AQF98_04450 | Q8A128 | Positive | 968121 - 969359 | 46190.0 |
| amp nucleosidase | AQF98_04455 | P0AE13 | Positive | 969505 - 970368 | 31656.4 |
| phosphohistidine phosphatase | AQF98_04460 | Not Available | Negative | 970435 - 970935 | 18879.6 |
| heptosyltransferase | AQF98_04465 | Not Available | Negative | 970928 - 971962 | 38675.4 |
| hypothetical protein | AQF98_04470 | Not Available | Negative | 971963 - 972568 | 23256.7 |
| dna polymerase iv | AQF98_04475 | P94544 | Negative | 972633 - 974324 | 62959.8 |
| magnesium transporter | AQF98_04480 | Q5SMG8 | Negative | 974372 - 975748 | 51736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

