Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_04285 | Not Available | Negative | 921073 - 921891 | 30436.4 |
| hypothetical protein | AQF98_04290 | Not Available | Negative | 922288 - 922545 | 10122.4 |
| hypothetical protein | AQF98_04295 | Not Available | Negative | 922582 - 923085 | 19151.9 |
| two-component system response regulator | AQF98_04300 | Q8FFE0 | Negative | 923462 - 924166 | 26772.8 |
| anhydro-n-acetylmuramic acid kinase | AQF98_04305 | Q15RS7 | Positive | 924455 - 925651 | 43532.4 |
| susc/raga family tonb-linked outer membrane protein | AQF98_04310 | T2KMI3 | Positive | 925690 - 928695 | 108724.0 |
| hypothetical protein | AQF98_04315 | Not Available | Positive | 928717 - 930024 | 46993.0 |
| beta-n-acetylglucosaminidase | AQF98_04320 | O05213 | Positive | 930091 - 931842 | 65611.4 |
| deor family transcriptional regulator | AQF98_04325 | P77721 | Negative | 931851 - 932594 | 27232.3 |
| hypothetical protein | AQF98_04330 | P35164 | Positive | 932730 - 934043 | 49539.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

