Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-atpase uvra | AQF98_04180 | Q5HQW9 | Negative | 896358 - 899159 | 103863.0 |
| rna polymerase subunit sigma-24 | AQF98_04185 | Not Available | Positive | 899421 - 900008 | 23053.0 |
| hypothetical protein | AQF98_04190 | Not Available | Positive | 900318 - 900509 | 7177.54 |
| hypothetical protein | AQF98_04195 | Not Available | Negative | 900587 - 901261 | 24854.5 |
| hypothetical protein | AQF98_04200 | Not Available | Positive | 901465 - 902421 | 37186.4 |
| endonuclease iii | AQF98_04205 | Q4UK93 | Positive | 902481 - 903140 | 24982.3 |
| dna recombination/repair protein reca | AQF98_04210 | Q11QM8 | Positive | 903268 - 904281 | 36291.9 |
| hypothetical protein | AQF98_04215 | Not Available | Negative | 904402 - 904623 | 8399.7 |
| trna threonylcarbamoyl adenosine modification protein tsad | AQF98_04220 | A0M1X3 | Negative | 904635 - 905636 | 36092.8 |
| hypothetical protein | AQF98_04225 | Not Available | Positive | 905705 - 910117 | 163949.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

