Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_03980 | Not Available | Negative | 845719 - 846369 | 24976.2 |
| rna polymerase subunit sigma-70 | AQF98_03985 | Not Available | Negative | 846376 - 846882 | 19599.5 |
| hypothetical protein | AQF98_03990 | Not Available | Positive | 847231 - 847704 | 17380.8 |
| transcriptional regulator | AQF98_03995 | P39647 | Negative | 847785 - 848669 | 33616.3 |
| hypothetical protein | AQF98_04000 | Q89YX1 | Positive | 848729 - 849700 | 35034.6 |
| hypothetical protein | AQF98_04005 | Not Available | Negative | 849810 - 850202 | 13208.9 |
| hypothetical protein | AQF98_04010 | P54663 | Positive | 850474 - 852384 | 73488.1 |
| luxr family transcriptional regulator | AQF98_04015 | O07528 | Positive | 852374 - 853009 | 23427.0 |
| transporter | AQF98_04020 | P96668 | Negative | 853023 - 853919 | 31372.8 |
| transcriptional regulator | AQF98_04025 | P39389 | Positive | 854018 - 855430 | 52397.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

