Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase | AQF98_03930 | P0A1W3 | Negative | 833856 - 835049 | 45682.1 |
| signal peptidase | AQF98_03935 | P44454 | Negative | 835214 - 836413 | 45592.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AQF98_03940 | A0LZI4 | Negative | 836417 - 837160 | 27239.5 |
| hypothetical protein | AQF98_03945 | Not Available | Negative | 837157 - 837825 | 24893.5 |
| chromosome partitioning protein parb | AQF98_03950 | P26497 | Negative | 837825 - 838724 | 33452.4 |
| chromosome partitioning protein para | AQF98_03955 | P37522 | Negative | 838734 - 839537 | 29435.6 |
| nadph-dependent fmn reductase | AQF98_03960 | Not Available | Positive | 839717 - 840238 | 19609.7 |
| hypothetical protein | AQF98_03965 | Not Available | Negative | 840329 - 840784 | 16922.5 |
| abc transporter substrate-binding protein | AQF98_03970 | A1A968 | Positive | 840829 - 842460 | 62114.7 |
| tonb-dependent receptor | AQF98_03975 | Not Available | Negative | 842958 - 845387 | 88344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

