Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | AQF98_03825 | Not Available | Positive | 812974 - 813417 | 16234.4 |
| membrane assembly protein asma | AQF98_03830 | Not Available | Negative | 813515 - 816100 | 93355.4 |
| peptidase m28 | AQF98_03835 | Not Available | Positive | 816243 - 817946 | 62332.6 |
| hypothetical protein | AQF98_03840 | Not Available | Positive | 817961 - 818941 | 36269.7 |
| thioesterase | AQF98_03845 | Not Available | Positive | 819007 - 819402 | 14728.7 |
| shikimate kinase | AQF98_03850 | Q8A2B2 | Negative | 819464 - 819961 | 18664.5 |
| hypothetical protein | AQF98_03855 | Not Available | Negative | 819958 - 820401 | 17174.4 |
| abc transporter permease | AQF98_03860 | P94311 | Negative | 820403 - 821458 | 38972.2 |
| doxx family protein | AQF98_03865 | Not Available | Negative | 821459 - 822610 | 43408.1 |
| hypothetical protein | AQF98_03870 | Not Available | Negative | 822622 - 823164 | 20694.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

