Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | AQF98_03725 | Not Available | Positive | 790379 - 791047 | 24181.9 |
| gmc family oxidoreductase | AQF98_03730 | M1VMF7 | Positive | 791063 - 792766 | 63853.4 |
| oxidoreductase | AQF98_03735 | P55480 | Positive | 792854 - 794011 | 42368.1 |
| ap endonuclease | AQF98_03740 | Not Available | Positive | 794016 - 795068 | 39262.2 |
| hypothetical protein | AQF98_03745 | P95339 | Positive | 795075 - 795458 | 13383.3 |
| oxidoreductase | AQF98_03750 | Not Available | Positive | 795485 - 796942 | 53827.9 |
| glycosyl hydrolase | AQF98_03755 | Not Available | Positive | 796972 - 797667 | 25793.8 |
| mfs transporter | AQF98_03760 | P76417 | Positive | 797757 - 798989 | 45602.6 |
| xylose isomerase | AQF98_03765 | Not Available | Positive | 799023 - 799901 | 32935.5 |
| hypothetical protein | AQF98_03770 | Not Available | Negative | 799903 - 800649 | 27857.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

