Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | AQF98_03675 | Not Available | Positive | 775779 - 778805 | 109317.0 |
| carbohydrate-binding protein susd | AQF98_03680 | Not Available | Positive | 778832 - 780379 | 56998.1 |
| hypothetical protein | AQF98_03685 | Not Available | Positive | 780400 - 781287 | 32194.1 |
| beta-glucosidase | AQF98_03690 | Not Available | Positive | 781354 - 783021 | 60546.9 |
| beta-glucosidase | AQF98_03695 | A6LGF6 | Positive | 783033 - 784373 | 50867.5 |
| hypothetical protein | AQF98_03700 | Not Available | Positive | 784470 - 784877 | 14688.6 |
| beta-d-glucoside glucohydrolase | AQF98_03705 | P33363 | Positive | 784967 - 787276 | 83890.0 |
| phospholipase | AQF98_03710 | Not Available | Positive | 787370 - 788146 | 29476.6 |
| transcriptional regulator | AQF98_03715 | A6GXW2 | Negative | 788399 - 789127 | 27246.2 |
| nad-dependent epimerase | AQF98_03720 | Q4L3L8 | Negative | 789207 - 790151 | 35587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

