Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_03525 | O22190 | Positive | 744857 - 746368 | 58398.7 |
| hypothetical protein | AQF98_03530 | O31670 | Positive | 746503 - 746910 | 15405.0 |
| histidine kinase | AQF98_03535 | Q9LEV3 | Positive | 747004 - 747432 | 15788.5 |
| hypothetical protein | AQF98_03540 | Not Available | Negative | 747429 - 747845 | 15788.8 |
| hypothetical protein | AQF98_03545 | Not Available | Negative | 747851 - 748384 | 19965.7 |
| rna methyltransferase | AQF98_03550 | Q8AA22 | Negative | 748417 - 749853 | 53894.8 |
| phenylalanyl-trna synthetase subunit alpha | AQF98_03555 | Not Available | Negative | 750003 - 750113 | 4094.12 |
| marr family transcriptional regulator | AQF98_03560 | Not Available | Positive | 750460 - 750954 | 19284.6 |
| hypothetical protein | AQF98_03565 | Not Available | Positive | 750951 - 751715 | 27959.2 |
| transcriptional regulator | AQF98_03570 | Not Available | Positive | 751854 - 752720 | 34396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

