Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase | AQF98_03475 | Q11RT7 | Negative | 734073 - 734633 | 20630.2 |
| 50s ribosomal protein l25 | AQF98_03480 | A5FKV4 | Negative | 734977 - 735558 | 21316.2 |
| ribose-phosphate pyrophosphokinase | AQF98_03485 | Q7MT83 | Negative | 735678 - 736619 | 34045.3 |
| Trna-gln | Not Available | Not Available | Positive | 736687 - 736760 | Not Available |
| multidrug transporter | AQF98_03495 | Not Available | Positive | 736993 - 740100 | 117331.0 |
| lipid-binding protein | AQF98_03500 | Not Available | Positive | 740304 - 740891 | 20806.0 |
| response regulator | AQF98_03505 | Not Available | Positive | 741032 - 741427 | 14849.9 |
| mbl fold metallo-hydrolase | AQF98_03510 | Q7D3U0 | Negative | 741444 - 742214 | 29395.7 |
| single-stranded-dna-specific exonuclease recj | AQF98_03515 | O32044 | Positive | 742359 - 744068 | 63461.0 |
| abc transporter atp-binding protein | AQF98_03520 | P45073 | Positive | 744110 - 744844 | 27396.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

