Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l16 | AQF98_03275 | A6LEI4 | Negative | 695737 - 696159 | 15914.8 |
| 30s ribosomal protein s3 | AQF98_03280 | A5FMZ4 | Negative | 696195 - 697043 | 30462.8 |
| 50s ribosomal protein l22 | AQF98_03285 | A0M593 | Negative | 697049 - 697411 | 13717.8 |
| 30s ribosomal protein s19 | AQF98_03290 | Q5L8B3 | Negative | 697419 - 697685 | 9989.11 |
| 50s ribosomal protein l2 | AQF98_03295 | A6LEI8 | Negative | 697685 - 698509 | 29827.2 |
| 50s ribosomal protein l23 | AQF98_03300 | B3QY26 | Negative | 698533 - 698823 | 10713.2 |
| 50s ribosomal protein l4 | AQF98_03305 | A6KYJ4 | Negative | 698825 - 699454 | 23011.7 |
| 50s ribosomal protein l3 | AQF98_03310 | Q5L8A9 | Negative | 699459 - 700076 | 21814.3 |
| hypothetical protein | AQF98_03315 | Not Available | Negative | 700259 - 700654 | 14529.3 |
| permease | AQF98_03320 | O32134 | Negative | 700651 - 701487 | 28936.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

