Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | AQF98_03175 | Q5L8D7 | Negative | 684812 - 685414 | 21988.1 |
| dna-directed rna polymerase subunit alpha | AQF98_03180 | A0M573 | Negative | 685544 - 686536 | 37326.1 |
| 30s ribosomal protein s4 | AQF98_03185 | Q8A4A1 | Negative | 686614 - 687222 | 22923.5 |
| 30s ribosomal protein s11 | AQF98_03190 | Q11QD6 | Negative | 687288 - 687677 | 13762.8 |
| 30s ribosomal protein s13 | AQF98_03195 | Q11QD5 | Negative | 687822 - 688199 | 14092.2 |
| translation initiation factor if-1 | AQF98_03200 | Q5L8D1 | Negative | 688395 - 688613 | 8308.24 |
| methionine aminopeptidase | AQF98_03205 | P50614 | Negative | 688685 - 689470 | 28457.3 |
| preprotein translocase subunit secy | AQF98_03210 | P43416 | Negative | 689536 - 690873 | 48500.9 |
| 50s ribosomal protein l15 | AQF98_03215 | A0M579 | Negative | 690877 - 691323 | 15646.0 |
| 50s ribosomal protein l30 | AQF98_03220 | B9E9K9 | Negative | 691430 - 691609 | 6606.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

