Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 673393 - 673754 | Not Available |
| atpase | AQF98_03130 | P39342 | Positive | 673612 - 675183 | 56789.9 |
| nucleotidyltransferase | AQF98_03135 | Not Available | Positive | 675237 - 676136 | 34047.5 |
| hypothetical protein | AQF98_03140 | Not Available | Positive | 676127 - 677203 | 41447.7 |
| hypothetical protein | AQF98_03145 | S5VBU1 | Positive | 677228 - 677923 | 26885.4 |
| molecular chaperone dnak | AQF98_03150 | A6LDG8 | Negative | 678041 - 679948 | 68186.8 |
| methyltransferase | AQF98_03155 | Not Available | Negative | 680283 - 681485 | 45386.3 |
| gmc family oxidoreductase | AQF98_03160 | Q3YAT3 | Positive | 681600 - 683336 | 63571.8 |
| transcriptional initiation protein tat | AQF98_03165 | Not Available | Positive | 683346 - 683972 | 23312.0 |
| (alpha)-aspartyl dipeptidase | AQF98_03170 | Q93RZ5 | Positive | 684062 - 684754 | 25653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

