Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | AQF98_03030 | Not Available | Positive | 648703 - 649938 | 46090.1 |
| methylmalonyl-coa carboxyltransferase | AQF98_03035 | Q3J4E3 | Positive | 650012 - 651553 | 56181.3 |
| mfs transporter | AQF98_03040 | Q8X4V6 | Positive | 651627 - 652796 | 42652.7 |
| gcn5 family acetyltransferase | AQF98_03045 | Not Available | Positive | 652798 - 653208 | 15795.1 |
| peptidase m42 | AQF98_03050 | Q8TZW4 | Positive | 653283 - 654401 | 41620.9 |
| hypothetical protein | AQF98_03055 | Not Available | Positive | 654445 - 654720 | 10561.3 |
| hypothetical protein | AQF98_03060 | Not Available | Positive | 655018 - 655467 | 17000.9 |
| hypothetical protein | AQF98_03065 | Not Available | Positive | 655532 - 656677 | 42916.1 |
| hypothetical protein | AQF98_03070 | Not Available | Positive | 656921 - 660121 | 118459.0 |
| hypothetical protein | AQF98_03075 | Not Available | Positive | 660108 - 661589 | 55622.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

