Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine nucleoside phosphorylase | AQF98_02980 | P46354 | Negative | 635855 - 636670 | 29836.3 |
| tetraacyldisaccharide 4'-kinase | AQF98_02985 | A6L0S5 | Negative | 636642 - 637694 | 39840.7 |
| multidrug transporter acrb | AQF98_02990 | Q7N3E2 | Negative | 637754 - 640816 | 111992.0 |
| rnd transporter | AQF98_02995 | B4EY99 | Negative | 640877 - 641926 | 37973.5 |
| transporter | AQF98_03000 | Not Available | Negative | 641930 - 643288 | 50907.3 |
| tetr family transcriptional regulator | AQF98_03005 | Not Available | Negative | 643308 - 643943 | 24145.5 |
| 1-pyrroline-5-carboxylate dehydrogenase | AQF98_03010 | Q54RA2 | Positive | 644073 - 645704 | 59916.4 |
| carbonic anhydrase | AQF98_03015 | P9WPJ8 | Negative | 645830 - 646465 | 23041.4 |
| hypothetical protein | AQF98_03020 | Q55415 | Negative | 646470 - 648074 | 57662.7 |
| hypothetical protein | AQF98_03025 | Not Available | Negative | 648163 - 648504 | 12932.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

