Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_02930 | Not Available | Positive | 624782 - 626440 | 62948.3 |
| hypothetical protein | AQF98_02935 | Not Available | Negative | 626494 - 626916 | 16160.1 |
| hypothetical protein | AQF98_02940 | Not Available | Negative | 626919 - 627143 | 8214.79 |
| beta-galactosidase | AQF98_02945 | Q08638 | Negative | 627247 - 628584 | 50480.1 |
| dna mismatch repair protein muts | AQF98_02950 | P70755 | Negative | 628665 - 630479 | 68562.7 |
| 50s rrna methyltransferase | AQF98_02955 | A6LDQ1 | Positive | 630533 - 631006 | 18040.9 |
| hypothetical protein | AQF98_02960 | Not Available | Negative | 631259 - 631807 | 19551.6 |
| cyclophilin | AQF98_02965 | P29820 | Negative | 631878 - 632339 | 16761.8 |
| asparagine synthetase b | AQF98_02970 | Not Available | Positive | 632514 - 633776 | 47871.0 |
| hypothetical protein | AQF98_02975 | Not Available | Negative | 633828 - 635855 | 77672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

