Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic abc transporter atp-binding protein | AQF98_02830 | O31708 | Negative | 601379 - 603172 | 67536.6 |
| pseudouridine synthase | AQF98_02835 | Q89ZY4 | Negative | 603240 - 604007 | 28711.3 |
| hypothetical protein | AQF98_02840 | Not Available | Positive | 604187 - 604645 | 16975.5 |
| dinb superfamily protein | AQF98_02845 | Not Available | Positive | 604647 - 605093 | 17069.9 |
| hypothetical protein | AQF98_02850 | Not Available | Positive | 605170 - 605991 | 30518.8 |
| hypothetical protein | AQF98_02855 | Not Available | Positive | 606083 - 606745 | 24695.4 |
| pseudouridylate synthase | AQF98_02860 | Not Available | Positive | 606845 - 607621 | 29071.1 |
| dead/deah box helicase | AQF98_02865 | Q9Z6C9 | Positive | 607770 - 609671 | 70075.8 |
| hypothetical protein | AQF98_02870 | Not Available | Negative | 609781 - 610119 | 11987.8 |
| aldo/keto reductase | AQF98_02875 | A2XRZ0 | Positive | 610265 - 611275 | 36776.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

