Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine sulfoxide reductase b | AQF98_02780 | Q9ZS91 | Negative | 588486 - 588965 | 17694.2 |
| succinate--coa ligase | AQF98_02785 | Q4ULQ8 | Negative | 589246 - 590118 | 29711.3 |
| glutamate:protein symporter | AQF98_02790 | P96603 | Negative | 590425 - 591699 | 46057.9 |
| hypothetical protein | AQF98_02795 | Not Available | Positive | 591926 - 592348 | 15902.4 |
| cyanophycinase | AQF98_02800 | P58562 | Negative | 592523 - 593362 | 30750.6 |
| hypothetical protein | AQF98_02805 | Not Available | Negative | 593394 - 594494 | 39060.6 |
| hypothetical protein | AQF98_02810 | Not Available | Negative | 594552 - 595940 | 51680.7 |
| susc/raga family tonb-linked outer membrane protein | AQF98_02815 | Not Available | Negative | 595952 - 599263 | 121663.0 |
| hypothetical protein | AQF98_02820 | Not Available | Negative | 599449 - 600642 | 44578.3 |
| rna polymerase subunit sigma-24 | AQF98_02825 | Not Available | Negative | 600758 - 601330 | 21865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

