Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase | AQF98_02730 | Q5X986 | Negative | 576966 - 578012 | 39263.4 |
| subclass b1 metallo-beta-lactamase | AQF98_02735 | Q9XBN7 | Negative | 578009 - 578719 | 26523.1 |
| acyltransferase | AQF98_02740 | Q93XI4 | Negative | 578709 - 579584 | 32957.0 |
| hypothetical protein | AQF98_02745 | Q1M7A0 | Negative | 579717 - 580337 | 23281.7 |
| hypothetical protein | AQF98_02750 | Q4L8Q7 | Positive | 580473 - 582437 | 74131.9 |
| hypothetical protein | AQF98_02755 | Not Available | Negative | 582805 - 583227 | 15696.8 |
| ribonucleoside-diphosphate reductase | AQF98_02760 | P23921 | Negative | 583311 - 585695 | 89187.3 |
| ribonucleoside-diphosphate reductase | AQF98_02765 | P49730 | Negative | 585854 - 586825 | 37122.3 |
| hypothetical protein | AQF98_02770 | O83958 | Negative | 587272 - 587658 | 14371.7 |
| hypothetical protein | AQF98_02775 | Not Available | Negative | 587833 - 588246 | 15530.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

