Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_02630 | Not Available | Negative | 552988 - 553446 | 16445.5 |
| pseudouridine synthase | AQF98_02635 | Q8D8G1 | Negative | 553583 - 554269 | 26074.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AQF98_02640 | Q11Q55 | Negative | 554471 - 555286 | 29418.7 |
| carbamoyl phosphate synthase small subunit | AQF98_02645 | Q8KGA2 | Positive | 555640 - 556752 | 40771.6 |
| abc transporter atp-binding protein | AQF98_02650 | Q1BWI2 | Positive | 556933 - 557700 | 28547.3 |
| abc transporter permease | AQF98_02655 | Not Available | Positive | 557785 - 558876 | 39682.0 |
| fmn reductase | AQF98_02660 | Q07923 | Positive | 559126 - 559689 | 20901.1 |
| porin | AQF98_02665 | Q8EHC1 | Positive | 559761 - 560444 | 23104.6 |
| enolase | AQF98_02670 | A5FN12 | Positive | 560662 - 561957 | 46427.9 |
| alpha-n-acetylglucosaminidase | AQF98_02675 | Q9FNA3 | Negative | 562014 - 564161 | 81346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

