Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | AQF98_02580 | C6BYB7 | Negative | 541869 - 543446 | 58616.3 |
| serine carboxypeptidase | AQF98_02585 | Q9UXR8 | Negative | 543530 - 544756 | 46595.6 |
| hydrolase | AQF98_02590 | Not Available | Positive | 544932 - 545768 | 31132.3 |
| two-component system response regulator | AQF98_02595 | Q814J1 | Negative | 545749 - 546471 | 27801.1 |
| histidine kinase | AQF98_02600 | Not Available | Negative | 546474 - 547568 | 42386.9 |
| hypothetical protein | AQF98_02605 | Not Available | Positive | 547760 - 548119 | 13544.5 |
| hypothetical protein | AQF98_02610 | Not Available | Positive | 548221 - 548427 | 8010.1 |
| glycoside hydrolase family 3 | AQF98_02615 | A7LXU3 | Positive | 548535 - 550841 | 85239.1 |
| glucosylceramidase | AQF98_02620 | Q7M4T0 | Positive | 550853 - 552307 | 52366.1 |
| hypothetical protein | AQF98_02625 | Not Available | Positive | 552494 - 552937 | 16153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

