Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit beta | AQF98_02425 | Q11Y90 | Positive | 509640 - 511142 | 54130.0 |
| atp synthase subunit epsilon | AQF98_02430 | Q2RZV2 | Positive | 511228 - 511473 | 8630.54 |
| hypothetical protein | AQF98_02435 | Not Available | Negative | 511529 - 512128 | 22969.4 |
| branched-chain amino acid aminotransferase | AQF98_02440 | Not Available | Positive | 512655 - 513545 | 33508.4 |
| dihydroxy-acid dehydratase | AQF98_02445 | Not Available | Positive | 513798 - 515477 | 59458.9 |
| acetolactate synthase catalytic subunit | AQF98_02450 | Not Available | Positive | 515482 - 517221 | 63438.5 |
| acetohydroxyacid synthase small subunit | AQF98_02455 | P37252 | Positive | 517228 - 517830 | 23545.2 |
| bleomycin resistance protein | AQF98_02460 | Not Available | Positive | 517936 - 518313 | 14667.4 |
| ketol-acid reductoisomerase | AQF98_02465 | Q11VZ3 | Positive | 518494 - 519975 | 54031.3 |
| isopropylmalate isomerase | AQF98_02470 | Q11NN8 | Positive | 520055 - 521458 | 50688.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

