Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_02375 | Not Available | Negative | 501703 - 502917 | 46197.1 |
| hypothetical protein | AQF98_02380 | Not Available | Negative | 502901 - 503551 | 24835.8 |
| rna polymerase subunit sigma | AQF98_02385 | Not Available | Negative | 503657 - 504202 | 21337.7 |
| gtpase obg | AQF98_02390 | Q11Z03 | Negative | 504327 - 505322 | 35922.4 |
| adenylate kinase | AQF98_02395 | A6GZB9 | Negative | 505397 - 505966 | 21155.3 |
| Trna-arg | Not Available | Not Available | Positive | 506343 - 506416 | Not Available |
| peroxiredoxin | AQF98_02405 | Q04JB8 | Negative | 506582 - 507046 | 17112.4 |
| dtdp-4-dehydrorhamnose reductase | AQF98_02410 | O66251 | Negative | 507223 - 508137 | 33845.5 |
| hypothetical protein | AQF98_02415 | Not Available | Positive | 508277 - 508879 | 22741.0 |
| hypothetical protein | AQF98_02420 | Not Available | Positive | 508925 - 509434 | 18886.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

