Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_02065 | Not Available | Negative | 432205 - 432684 | 17538.4 |
| tyrosine--trna ligase | AQF98_02070 | B2RHN4 | Negative | 432790 - 434076 | 48034.5 |
| hypothetical protein | AQF98_02075 | Not Available | Positive | 434297 - 434968 | 26241.6 |
| dna ligase | AQF98_02080 | A5FE87 | Positive | 435032 - 437044 | 75741.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AQF98_02085 | A6H0M8 | Positive | 437087 - 437977 | 31930.5 |
| histone h1 | AQF98_02090 | Not Available | Negative | 438050 - 438226 | 6453.79 |
| 8-amino-7-oxononanoate synthase | AQF98_02095 | B0KC20 | Negative | 438494 - 439735 | 46266.0 |
| cell division protein ftsz | AQF98_02100 | Q9ALA3 | Negative | 439898 - 441544 | 59876.0 |
| cell division protein ftsa | AQF98_02105 | P47203 | Negative | 441673 - 443028 | 49368.9 |
| udp-n-acetylmuramate--alanine ligase | AQF98_02115 | A6H194 | Negative | 444212 - 445564 | 49508.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

