Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | AQF98_01765 | Q4A054 | Positive | 356983 - 357684 | 25054.5 |
| hypothetical protein | AQF98_01770 | Not Available | Positive | 357759 - 358133 | 13785.3 |
| hydrolase | AQF98_01775 | Not Available | Positive | 358640 - 359164 | 19310.5 |
| hypothetical protein | AQF98_01780 | Not Available | Positive | 359226 - 359636 | 15616.0 |
| phosphoribosylformylglycinamidine synthase | AQF98_01785 | Not Available | Positive | 359667 - 360200 | 19496.6 |
| flavin reductase | AQF98_01790 | Not Available | Negative | 360242 - 361129 | 32646.4 |
| fumarylacetoacetate hydrolase | AQF98_01795 | Q96GK7 | Negative | 361420 - 362415 | 36682.0 |
| hypothetical protein | AQF98_01800 | B9KKA1 | Negative | 362511 - 363209 | 24727.9 |
| homogentisate 1,2-dioxygenase | AQF98_01805 | Q97Y16 | Positive | 363462 - 364628 | 44642.9 |
| 4-hydroxyphenylpyruvate dioxygenase | AQF98_01810 | Q9S2F4 | Positive | 364706 - 365836 | 42506.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

