Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit r | AQF98_01565 | Not Available | Positive | 314395 - 314856 | 17904.9 |
| hypothetical protein | AQF98_01570 | Not Available | Negative | 314861 - 315394 | 20020.5 |
| hypothetical protein | AQF98_01575 | Not Available | Negative | 315399 - 316136 | 26578.2 |
| valine--trna ligase | AQF98_01580 | A0M5I5 | Negative | 316139 - 318823 | 102877.0 |
| hypothetical protein | AQF98_01585 | Not Available | Positive | 319204 - 319662 | 17210.7 |
| hypothetical protein | AQF98_01590 | Not Available | Positive | 319675 - 320379 | 25770.6 |
| restriction endonuclease | AQF98_01595 | Not Available | Negative | 320394 - 321020 | 23795.5 |
| cadmium/zinc/cobalt-transporting atpase | AQF98_01600 | Q59998 | Negative | 321051 - 323015 | 70558.0 |
| peptidase m13 | AQF98_01605 | Q9W5Y0 | Positive | 323354 - 325393 | 76194.6 |
| hypothetical protein | AQF98_01610 | Not Available | Negative | 325453 - 325791 | 13146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

