Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding protein | AQF98_01515 | Not Available | Positive | 302264 - 303340 | 41184.1 |
| trna hydroxylase | AQF98_01520 | Not Available | Negative | 303571 - 304152 | 22332.8 |
| heat-shock protein hsp70 | AQF98_01525 | P20442 | Positive | 304318 - 306180 | 67879.4 |
| hypothetical protein | AQF98_01530 | Not Available | Negative | 306829 - 307131 | 10809.9 |
| hypothetical protein | AQF98_01535 | Not Available | Positive | 307435 - 308331 | 33580.9 |
| hypothetical protein | AQF98_01540 | Not Available | Negative | 308334 - 308780 | 16607.3 |
| hypothetical protein | AQF98_01545 | Not Available | Positive | 308916 - 309212 | 10951.1 |
| gtp-binding protein | AQF98_01550 | Q7VMI2 | Negative | 309276 - 310370 | 39911.8 |
| hypothetical protein | AQF98_01555 | Not Available | Negative | 310581 - 313160 | 94044.2 |
| dna polymerase iii subunit delta | AQF98_01560 | Not Available | Negative | 313313 - 314338 | 39143.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

