Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AQF98_01465 | Not Available | Negative | 294836 - 295501 | 24549.3 |
| cysteine methyltransferase | AQF98_01470 | Q46EW4 | Positive | 296223 - 296714 | 18265.0 |
| hypothetical protein | AQF98_01475 | P75839 | Positive | 296717 - 297232 | 19283.0 |
| hypothetical protein | AQF98_01480 | Not Available | Positive | 297284 - 297784 | 19270.2 |
| hypothetical protein | AQF98_01485 | Not Available | Negative | 297781 - 298185 | 15432.5 |
| gliding motility protein gldc | AQF98_01490 | Not Available | Negative | 298324 - 298659 | 13121.6 |
| hypothetical protein | AQF98_01495 | Not Available | Negative | 298788 - 299054 | 10058.0 |
| hypothetical protein | AQF98_01500 | Not Available | Negative | 299075 - 299371 | 11159.6 |
| dead/deah box helicase | AQF98_01505 | Not Available | Negative | 299377 - 300720 | 50648.4 |
| dihydroorotase | AQF98_01510 | Q9HMH9 | Positive | 300867 - 302201 | 49048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

