Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | AQF98_01415 | Not Available | Negative | 286131 - 286658 | 19221.2 |
| fes assembly protein iscx | AQF98_01420 | Not Available | Negative | 286800 - 287045 | 9857.29 |
| ferredoxin | AQF98_01425 | O51882 | Negative | 287160 - 287492 | 12124.5 |
| oxidoreductase | AQF98_01430 | Not Available | Negative | 287535 - 288296 | 28053.9 |
| cytochrome c biogenesis protein | AQF98_01435 | P45037 | Negative | 288296 - 290767 | 93035.9 |
| cytochrome c biogenesis protein | AQF98_01440 | Not Available | Negative | 290767 - 291183 | 15678.8 |
| protein-methionine-s-oxide reductase | AQF98_01445 | Q3IUS0 | Negative | 291359 - 291997 | 23622.1 |
| glutamate dehydrogenase | AQF98_01450 | Q54KB7 | Negative | 292147 - 293568 | 51655.0 |
| hypothetical protein | AQF98_01455 | Not Available | Negative | 293713 - 293931 | 8296.64 |
| abc transporter permease | AQF98_01460 | Not Available | Negative | 293934 - 294590 | 25140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

