Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_01215 | P22525 | Negative | 245410 - 246987 | 60944.4 |
| atp phosphoribosyltransferase | AQF98_01220 | Q11TY6 | Positive | 247257 - 248108 | 30794.6 |
| histidinol dehydrogenase | AQF98_01225 | Q64RE7 | Positive | 248178 - 249461 | 45970.3 |
| histidinol phosphate aminotransferase | AQF98_01230 | Q11VM5 | Positive | 249541 - 250584 | 38765.8 |
| imidazoleglycerol-phosphate dehydratase | AQF98_01235 | D2QPE6 | Positive | 250655 - 251788 | 42526.7 |
| imidazole glycerol phosphate synthase subunit hish | AQF98_01240 | Q57MS0 | Positive | 252038 - 252658 | 22799.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | AQF98_01245 | A6GY76 | Positive | 252660 - 253409 | 28149.2 |
| imidazole glycerol phosphate synthase subunit hish | AQF98_01250 | A5FFX6 | Positive | 253485 - 254240 | 27246.0 |
| phosphoribosyl-atp pyrophosphatase | AQF98_01255 | Q8A7Z7 | Positive | 254425 - 255033 | 22990.4 |
| hypothetical protein | AQF98_01260 | Not Available | Positive | 255101 - 256003 | 34087.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

