Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline hydroxylase | AQF98_01115 | Not Available | Negative | 225059 - 225658 | 22944.1 |
| hypothetical protein | AQF98_01120 | Not Available | Negative | 225726 - 226430 | 27183.5 |
| hypothetical protein | AQF98_01125 | Not Available | Negative | 226576 - 227577 | 38491.0 |
| hypothetical protein | AQF98_01130 | O31485 | Negative | 227637 - 227927 | 10808.8 |
| threonine synthase | AQF98_01135 | Q58860 | Negative | 228018 - 229085 | 38614.1 |
| lysr family transcriptional regulator | AQF98_01140 | Q9F1R2 | Negative | 229271 - 230179 | 33657.2 |
| molecular chaperone hsc20 | AQF98_01145 | Q486Y7 | Negative | 230238 - 230765 | 20846.9 |
| rip metalloprotease rsep | AQF98_01150 | O67776 | Negative | 230806 - 232209 | 51188.3 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | AQF98_01155 | Q8A684 | Negative | 232247 - 233392 | 41801.0 |
| hypothetical protein | AQF98_01160 | Not Available | Negative | 233436 - 234941 | 56581.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

