Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | AQF98_00865 | B9KBQ2 | Negative | 169546 - 171183 | 60084.6 |
| translation factor sua5 | AQF98_00870 | P0AFR5 | Positive | 171402 - 172022 | 22913.6 |
| sodium:proton antiporter | AQF98_00875 | Not Available | Positive | 172129 - 173316 | 42594.4 |
| tryptophan synthase subunit alpha | AQF98_00880 | A6GWZ0 | Negative | 173430 - 174200 | 28553.4 |
| tryptophan synthase subunit beta | AQF98_00885 | A6L9K4 | Negative | 174286 - 175467 | 42963.6 |
| n-(5'-phosphoribosyl)anthranilate isomerase | AQF98_00890 | A6L9J9 | Negative | 175525 - 176142 | 22713.6 |
| anthranilate phosphoribosyltransferase | AQF98_00895 | A0M4T1 | Negative | 176388 - 177377 | 36053.0 |
| ion transporter | AQF98_00900 | D9N164 | Positive | 177582 - 178520 | 34709.0 |
| hypothetical protein | AQF98_00905 | Not Available | Positive | 178566 - 179120 | 21218.7 |
| hypothetical protein | AQF98_00910 | Not Available | Positive | 179210 - 179794 | 21865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

