Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_00815 | Not Available | Negative | 158950 - 159216 | 10087.2 |
| hypothetical protein | AQF98_00820 | Not Available | Negative | 159352 - 160959 | 58098.8 |
| haloacid dehalogenase | AQF98_00825 | Not Available | Negative | 161003 - 161611 | 23643.7 |
| hypothetical protein | AQF98_00830 | Not Available | Negative | 161622 - 162110 | 17829.3 |
| lipoprotein abc transporter atp-binding protein | AQF98_00835 | Q11SW8 | Negative | 162119 - 162769 | 23576.6 |
| succinyl-coa synthetase subunit beta | AQF98_00840 | A5FHX8 | Positive | 163072 - 164262 | 42630.4 |
| hypothetical protein | AQF98_00845 | Not Available | Positive | 164797 - 165999 | 44762.1 |
| hypothetical protein | AQF98_00850 | O34989 | Negative | 166000 - 167331 | 50523.1 |
| asparagine--trna ligase | AQF98_00855 | Q11Q97 | Positive | 167472 - 168908 | 54996.8 |
| gcn5 family acetyltransferase | AQF98_00860 | Not Available | Negative | 169115 - 169522 | 15268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

