Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AQF98_00765 | Not Available | Positive | 150672 - 151265 | 22754.8 |
| hypothetical protein | AQF98_00770 | Not Available | Positive | 151281 - 151844 | 21438.5 |
| xre family transcriptional regulator | AQF98_00775 | O31834 | Negative | 151841 - 152044 | 7489.54 |
| hypothetical protein | AQF98_00780 | Not Available | Negative | 152047 - 152856 | 31254.9 |
| hypothetical protein | AQF98_00785 | Not Available | Negative | 152858 - 153406 | 20713.1 |
| hypothetical protein | AQF98_00790 | Not Available | Negative | 153409 - 153957 | 20774.1 |
| rna polymerase subunit sigma | AQF98_00795 | P33656 | Positive | 154316 - 155176 | 32707.1 |
| glyceraldehyde-3-phosphate dehydrogenase | AQF98_00800 | Q02PG5 | Positive | 155284 - 156732 | 53582.0 |
| alcohol dehydrogenase | AQF98_00805 | O23016 | Negative | 156795 - 157778 | 36894.6 |
| peptidase m20 | AQF98_00810 | Not Available | Positive | 157949 - 158893 | 34875.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

