Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 118780 - 118853 | Not Available |
| peptidase s41 | AQF98_00665 | Not Available | Positive | 119270 - 122506 | 120675.0 |
| ribonuclease hi | AQF98_00670 | A4J7B3 | Positive | 122623 - 123081 | 17052.4 |
| hypothetical protein | AQF98_00675 | Not Available | Negative | 123505 - 124023 | 18999.9 |
| fructose 1,6-bisphosphatase | AQF98_00680 | A4SM33 | Negative | 124314 - 125360 | 37728.3 |
| phosphodiesterase | AQF98_00685 | Not Available | Negative | 125383 - 125874 | 18659.4 |
| hypothetical protein | AQF98_00690 | Not Available | Negative | 126140 - 127951 | 67245.0 |
| trna methyltransferase | AQF98_00695 | C6Y2G0 | Negative | 128026 - 128730 | 26523.0 |
| phosphoribosylformylglycinamidine synthase | AQF98_00705 | Q9M8D3 | Positive | 129553 - 133218 | 134434.0 |
| hypothetical protein | AQF98_00710 | Not Available | Negative | 133513 - 133860 | 13270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

